STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55704.1COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. (389 aa)    
Predicted Functional Partners:
EKF53908.1
COG0527 Aspartokinases.
 
 
 0.950
EKF56145.1
COG0031 Cysteine synthase.
 0.886
thrA
Bifunctional aspartokinase I/homoserine dehydrogenase I; COG0527 Aspartokinases.
 
 
 0.865
EKF56041.1
Transketolase; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
    
  0.826
EKF54378.1
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain; homocysteine S-methyltransferase domain.
  
 
 0.761
EKF56497.1
COG2873 O-acetylhomoserine sulfhydrylase.
 
 
 
0.743
metG
methionyl-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 
 0.741
EKF56093.1
COG1045 Serine acetyltransferase.
  
 
 0.736
EKF53913.1
COG0155 Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
  0.731
EKF54863.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
   
 
 0.730
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.