STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55643.1Signal transduction histidine kinase LytS; COG3275 Putative regulator of cell autolysis. (347 aa)    
Predicted Functional Partners:
EKF55644.1
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
 
 0.977
EKF54766.1
COG3279 Response regulator of the LytR/AlgR family.
  
  0.925
EKF54551.1
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
  
  0.925
EKF55731.1
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
 
 0.903
EKF56078.1
Two component transcriptional regulator, lyttr family protein; COG0784 FOG: CheY-like receiver.
 
  0.847
EKF55645.1
Glucose/galactose transporter; COG0738 Fucose permease.
     
 0.672
EKF54764.1
Hypothetical protein; COG3275 Putative regulator of cell autolysis.
  
  
 
0.501
EKF54552.1
Signal transduction histidine kinase LytS; COG3275 Putative regulator of cell autolysis.
  
  
 
0.499
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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