STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55483.1Acyl protein synthase/acyl-CoA reductase-like protein. (324 aa)    
Predicted Functional Partners:
EKF56010.1
Hypothetical protein; COG1012 NAD-dependent aldehyde dehydrogenases.
  
 
  0.878
EKF56749.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.753
EKF54863.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
  
 0.741
EKF56405.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
    
  0.694
EKF54310.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
    
  0.694
queE
Organic radical activating protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
  
     0.671
EKF55426.1
COG1012 NAD-dependent aldehyde dehydrogenases.
  
 
  0.561
EKF55669.1
Nudix hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.
  
     0.560
EKF56035.1
Orn/DAP/Arg decarboxylase 2; COG1166 Arginine decarboxylase (spermidine biosynthesis).
  
     0.539
EKF56121.1
Hypothetical protein.
  
     0.524
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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