STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55516.1Proton/sodium-glutamate symport protein; COG3633 Na+/serine symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (446 aa)    
Predicted Functional Partners:
EKF55518.1
COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase.
 
     0.795
EKF55519.1
COG0531 Amino acid transporters.
 
 
 
 0.793
EKF55517.1
COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes.
       0.786
EKF55514.1
COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.773
EKF55515.1
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.
       0.773
EKF55512.1
Nuclease; COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase.
 
     0.767
EKF55521.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.745
EKF55513.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
       0.727
EKF55520.1
COG1252 NADH dehydrogenase, FAD-containing subunit.
       0.712
EKF55522.1
Hypothetical protein.
       0.697
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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