STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55536.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
EKF55002.1
AcrB/AcrD/AcrF family heavy metal cation efflux protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.879
EKF53996.1
COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.879
EKF53808.1
Hypothetical protein.
 
      0.861
EKF55532.1
Hypothetical protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.692
EKF55533.1
COG1538 Outer membrane protein.
  
   0.653
EKF54616.1
FtsX family membrane protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
 
 0.633
EKF55535.1
Hypothetical protein.
       0.596
EKF55534.1
COG2132 Putative multicopper oxidases.
       0.555
EKF56570.1
ABC transporter ATP-binding protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
   
   0.474
EKF56571.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
   
   0.474
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.