STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55196.1COG3661 Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. (701 aa)    
Predicted Functional Partners:
EKF55192.1
Hypothetical protein.
     0.952
EKF55193.1
Endo-1,4-beta-xylanase; COG3693 Beta-1,4-xylanase.
 
   
 0.915
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
      0.797
EKF55960.1
alpha-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.775
EKF55447.1
COG3693 Beta-1,4-xylanase.
 
   
 0.775
EKF56518.1
COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
     0.703
EKF55959.1
Acetylesterase; COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
    0.693
EKF55195.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.675
EKF56379.1
Glycosyl hydrolase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.656
EKF56516.1
alpha-N-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.548
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.