Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKF53937.1 | EKF55137.1 | I215_15038 | I215_08907 | Hypothetical protein. | Colicin V production protein CvpA. | 0.755 |
EKF54658.1 | EKF55137.1 | I215_11324 | I215_08907 | Phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase. | Colicin V production protein CvpA. | 0.742 |
EKF54658.1 | EKF56624.1 | I215_11324 | I215_00380 | Phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase. | Amidophosphoribosyltransferase; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase. | 0.973 |
EKF54658.1 | purC | I215_11324 | I215_09796 | Phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase. | COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Belongs to the SAICAR synthetase family. | 0.967 |
EKF54658.1 | purE | I215_11324 | I215_14636 | Phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase. | Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.926 |
EKF54658.1 | purL | I215_11324 | I215_07611 | Phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.999 |
EKF54658.1 | purN | I215_11324 | I215_00400 | Phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.927 |
EKF55137.1 | EKF53937.1 | I215_08907 | I215_15038 | Colicin V production protein CvpA. | Hypothetical protein. | 0.755 |
EKF55137.1 | EKF54658.1 | I215_08907 | I215_11324 | Colicin V production protein CvpA. | Phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase. | 0.742 |
EKF55137.1 | EKF55138.1 | I215_08907 | I215_08912 | Colicin V production protein CvpA. | Hypothetical protein. | 0.602 |
EKF55137.1 | EKF55788.1 | I215_08907 | I215_06122 | Colicin V production protein CvpA. | Hypothetical protein. | 0.572 |
EKF55137.1 | EKF56014.1 | I215_08907 | I215_03685 | Colicin V production protein CvpA. | Hypothetical protein. | 0.599 |
EKF55137.1 | EKF56624.1 | I215_08907 | I215_00380 | Colicin V production protein CvpA. | Amidophosphoribosyltransferase; COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase. | 0.821 |
EKF55137.1 | purC | I215_08907 | I215_09796 | Colicin V production protein CvpA. | COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Belongs to the SAICAR synthetase family. | 0.785 |
EKF55137.1 | purE | I215_08907 | I215_14636 | Colicin V production protein CvpA. | Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.710 |
EKF55137.1 | purL | I215_08907 | I215_07611 | Colicin V production protein CvpA. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.983 |
EKF55137.1 | purN | I215_08907 | I215_00400 | Colicin V production protein CvpA. | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.569 |
EKF55138.1 | EKF55137.1 | I215_08912 | I215_08907 | Hypothetical protein. | Colicin V production protein CvpA. | 0.602 |
EKF55788.1 | EKF55137.1 | I215_06122 | I215_08907 | Hypothetical protein. | Colicin V production protein CvpA. | 0.572 |
EKF56014.1 | EKF55137.1 | I215_03685 | I215_08907 | Hypothetical protein. | Colicin V production protein CvpA. | 0.599 |
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