node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKF54677.1 | EKF55108.1 | I215_11419 | I215_08762 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | 0.951 |
EKF54677.1 | EKF55158.1 | I215_11419 | I215_09012 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.778 |
EKF54677.1 | EKF55625.1 | I215_11419 | I215_06712 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.973 |
EKF54677.1 | EKF55658.1 | I215_11419 | I215_05472 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.869 |
EKF54677.1 | EKF56042.1 | I215_11419 | I215_03825 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | COG1466 DNA polymerase III, delta subunit. | 0.950 |
EKF54677.1 | EKF56272.1 | I215_11419 | I215_02078 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | COG0587 DNA polymerase III, alpha subunit. | 0.951 |
EKF54677.1 | EKF56764.1 | I215_11419 | I215_01080 | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication. | 0.919 |
EKF55108.1 | EKF54677.1 | I215_08762 | I215_11419 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.951 |
EKF55108.1 | EKF55158.1 | I215_08762 | I215_09012 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.940 |
EKF55108.1 | EKF55625.1 | I215_08762 | I215_06712 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
EKF55108.1 | EKF55658.1 | I215_08762 | I215_05472 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.899 |
EKF55108.1 | EKF56042.1 | I215_08762 | I215_03825 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | COG1466 DNA polymerase III, delta subunit. | 0.999 |
EKF55108.1 | EKF56272.1 | I215_08762 | I215_02078 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | COG0587 DNA polymerase III, alpha subunit. | 0.959 |
EKF55108.1 | EKF56764.1 | I215_08762 | I215_01080 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication. | 0.999 |
EKF55108.1 | ligA | I215_08762 | I215_07961 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.849 |
EKF55108.1 | uvrB | I215_08762 | I215_02278 | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.516 |
EKF55158.1 | EKF54677.1 | I215_09012 | I215_11419 | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.778 |
EKF55158.1 | EKF55108.1 | I215_09012 | I215_08762 | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | COG2176 DNA polymerase III, alpha subunit (gram-positive type). | 0.940 |
EKF55158.1 | EKF55625.1 | I215_09012 | I215_06712 | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.810 |
EKF55158.1 | EKF55658.1 | I215_09012 | I215_05472 | COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | Exonuclease; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.765 |