STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55160.1Esterase; COG2382 Enterochelin esterase and related enzymes. (385 aa)    
Predicted Functional Partners:
EKF55445.1
Glycosyl hydrolase; COG3507 Beta-xylosidase.
 
  
  0.953
EKF55159.1
Acetylcholinesterase; COG2272 Carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family.
 
     0.867
EKF55193.1
Endo-1,4-beta-xylanase; COG3693 Beta-1,4-xylanase.
 
 
   0.795
EKF55447.1
COG3693 Beta-1,4-xylanase.
 
 
   0.782
EKF55161.1
Esterase; COG2382 Enterochelin esterase and related enzymes.
 
    
0.744
EKF56262.1
Glycoside hydrolase family protein.
  
     0.700
EKF56379.1
Glycosyl hydrolase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.666
EKF55446.1
GDSL family lipase; COG1613 ABC-type sulfate transport system, periplasmic component.
  
     0.639
EKF56517.1
COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.630
EKF55162.1
alpha-L-fucosidase.
 
     0.591
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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