STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF55015.1Methyltransferase; COG0742 N6-adenine-specific methylase. (178 aa)    
Predicted Functional Partners:
EKF55014.1
Hypothetical protein.
 
    0.857
EKF55013.1
Hypothetical protein.
       0.817
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
  
 0.777
EKF55654.1
Hypothetical protein.
  
     0.709
EKF56318.1
Hypothetical protein.
  
     0.664
EKF55248.1
Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.642
EKF55458.1
Hypothetical protein.
  
    0.624
EKF55012.1
COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
       0.593
EKF55817.1
COG1705 Muramidase (flagellum-specific).
 
     0.591
EKF55870.1
Hypothetical protein.
  
     0.538
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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