Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKF54088.1 | EKF54827.1 | I215_14209 | I215_10330 | COG0076 Glutamate decarboxylase and related PLP-dependent proteins. | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | 0.756 |
EKF54825.1 | EKF54826.1 | I215_10320 | I215_10325 | COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins. | Hypothetical protein. | 0.465 |
EKF54825.1 | EKF54827.1 | I215_10320 | I215_10330 | COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins. | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | 0.582 |
EKF54825.1 | kmo | I215_10320 | I215_12743 | COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.530 |
EKF54825.1 | pgi | I215_10320 | I215_10340 | COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins. | COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.423 |
EKF54826.1 | EKF54825.1 | I215_10325 | I215_10320 | Hypothetical protein. | COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins. | 0.465 |
EKF54826.1 | EKF54827.1 | I215_10325 | I215_10330 | Hypothetical protein. | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | 0.848 |
EKF54826.1 | EKF54828.1 | I215_10325 | I215_10335 | Hypothetical protein. | Peptidase M23; COG0739 Membrane proteins related to metalloendopeptidases. | 0.773 |
EKF54826.1 | pgi | I215_10325 | I215_10340 | Hypothetical protein. | COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.810 |
EKF54827.1 | EKF54088.1 | I215_10330 | I215_14209 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | COG0076 Glutamate decarboxylase and related PLP-dependent proteins. | 0.756 |
EKF54827.1 | EKF54825.1 | I215_10330 | I215_10320 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins. | 0.582 |
EKF54827.1 | EKF54826.1 | I215_10330 | I215_10325 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | Hypothetical protein. | 0.848 |
EKF54827.1 | EKF54828.1 | I215_10330 | I215_10335 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | Peptidase M23; COG0739 Membrane proteins related to metalloendopeptidases. | 0.773 |
EKF54827.1 | EKF54841.1 | I215_10330 | I215_10400 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | N-formylkynurenine (aryl-) formamidase. | 0.977 |
EKF54827.1 | kmo | I215_10330 | I215_12743 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.815 |
EKF54827.1 | kynU | I215_10330 | I215_11499 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.988 |
EKF54827.1 | nbaC | I215_10330 | I215_08787 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | 3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family. | 0.752 |
EKF54827.1 | pgi | I215_10330 | I215_10340 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.809 |
EKF54827.1 | trpA | I215_10330 | I215_09771 | COG3483 Tryptophan 2,3-dioxygenase (vermilion). | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.870 |
EKF54828.1 | EKF54826.1 | I215_10335 | I215_10325 | Peptidase M23; COG0739 Membrane proteins related to metalloendopeptidases. | Hypothetical protein. | 0.773 |
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