STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF54868.1COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2. (355 aa)    
Predicted Functional Partners:
EKF54869.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 0.999
EKF56578.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
 0.998
EKF56579.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
 0.998
EKF56524.1
Rieske (2Fe-2S) iron-sulfur domain containing protein; COG0723 Rieske Fe-S protein.
  
 
 0.998
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.993
EKF54866.1
COG2010 Cytochrome c, mono- and diheme variants.
 0.975
EKF54592.1
Hypothetical protein.
 
 0.974
EKF54593.1
COG2010 Cytochrome c, mono- and diheme variants.
 
 0.972
EKF53926.1
Hypothetical protein; COG1512 Beta-propeller domains of methanol dehydrogenase type.
    
   0.970
EKF56577.1
Hypothetical protein.
 
  
  0.951
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.