STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF54769.1Aldose 1-epimerase; COG2017 Galactose mutarotase and related enzymes. (295 aa)    
Predicted Functional Partners:
EKF54857.1
Transcriptional regulatory protein nadr; COG3172 Predicted ATPase/kinase involved in NAD metabolism.
      0.778
EKF54906.1
COG0153 Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.774
EKF54905.1
COG1085 Galactose-1-phosphate uridylyltransferase.
  
 0.604
EKF54770.1
COG0431 Predicted flavoprotein.
       0.541
EKF55795.1
COG1482 Phosphomannose isomerase.
 
  
 0.438
EKF55347.1
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
 
  
 0.414
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.