STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF54654.1Glycoside hydrolase family protein; COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (913 aa)    
Predicted Functional Partners:
uxaC
COG1904 Glucuronate isomerase.
  
 
 0.706
EKF55034.1
COG3250 Beta-galactosidase/beta-glucuronidase.
  
  
 
0.666
EKF56287.1
Glycoside hydrolase; COG3250 Beta-galactosidase/beta-glucuronidase.
  
  
 
0.653
EKF56516.1
alpha-N-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.626
EKF56517.1
COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.622
EKF55977.1
Xylan 1,4-beta-xylosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.605
EKF56518.1
COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
  0.592
EKF55211.1
COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB).
   
    0.534
EKF54039.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
   
 
  0.534
EKF53957.1
Aldose 1-epimerase; COG2017 Galactose mutarotase and related enzymes.
   
 
  0.534
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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