STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF54595.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
EKF54591.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.999
EKF54593.1
COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.977
EKF54592.1
Hypothetical protein.
 
 
 0.974
EKF54594.1
Cytochrome c oxidase accessory protein FixG; COG0348 Polyferredoxin.
 
  
 0.956
EKF54590.1
Cbb3-type cytochrome oxidase maturation protein; COG3197 Uncharacterized protein, possibly involved in nitrogen fixation.
 
  
 0.932
EKF54596.1
Cytochrome c biogenesis protein.
 
     0.925
EKF54589.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
 
   
 0.898
EKF54056.1
Hypothetical protein.
   
   0.707
EKF54865.1
Hypothetical protein.
 
 
 0.678
EKF54866.1
COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.655
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.