STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF54624.1Hypothetical protein. (338 aa)    
Predicted Functional Partners:
EKF54334.1
Glutamate synthase (NADPH) large subunit; COG0067 Glutamate synthase domain 1.
    
  0.886
EKF55770.1
Dissimilatory nitrite reductase; COG2132 Putative multicopper oxidases.
  
  0.847
EKF54625.1
Hypothetical protein.
       0.792
EKF54673.1
CinA-like protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
  
 
  0.771
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.767
EKF56466.1
Hypothetical protein.
  
 
 0.746
EKF53809.1
Hypothetical protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
  
 
 0.746
EKF55147.1
Azurin; COG3241 Azurin.
    
 
 0.704
EKF55765.1
COG3256 Nitric oxide reductase large subunit.
   
  0.665
EKF54642.1
COG3256 Nitric oxide reductase large subunit.
   
  0.665
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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