STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF54540.1Hypothetical protein. (458 aa)    
Predicted Functional Partners:
EKF54541.1
COG4206 Outer membrane cobalamin receptor protein.
 
     0.938
EKF54538.1
Hypothetical protein.
 
     0.777
EKF54539.1
Ankyrin repeat-containing protein; COG0666 FOG: Ankyrin repeat.
 
     0.764
EKF54537.1
NADPH oxidoreductase; COG3182 Uncharacterized iron-regulated membrane protein.
 
     0.689
EKF54542.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.656
EKF55594.1
COG4815 Uncharacterized protein conserved in bacteria.
  
     0.553
EKF54579.1
Hypothetical protein.
  
     0.485
EKF53948.1
COG2104 Sulfur transfer protein involved in thiamine biosynthesis.
  
     0.431
EKF56298.1
Glycoside hydrolase.
  
     0.426
EKF56292.1
Lipoprotein.
  
     0.418
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.