STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF54434.1Polysaccharide biosynthesis protein; COG2089 Sialic acid synthase. (352 aa)    
Predicted Functional Partners:
EKF54432.1
N-acylneuraminate cytidylyltransferase; COG1083 CMP-N-acetylneuraminic acid synthetase.
 
 0.992
EKF54450.1
COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog.
  
 0.943
EKF54433.1
Nucleotidyl transferase; COG0517 FOG: CBS domain.
 
  
 0.918
EKF54437.1
DegT/DnrJ/EryC1/StrS aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.893
EKF54436.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein; COG0110 Acetyltransferase (isoleucine patch superfamily).
  
 0.890
EKF54438.1
UDP-N-acetylglucosamine 4,6-dehydratase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
 
 0.853
EKF54448.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; COG1778 Low specificity phosphatase (HAD superfamily).
  
 0.811
EKF54435.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
    0.785
EKF54431.1
Hypothetical protein.
     
 0.699
EKF54443.1
COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.548
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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