STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF54245.1Zinc/iron permease. (224 aa)    
Predicted Functional Partners:
EKF55866.1
Arginase/agmatinase/formiminoglutamase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
     0.693
EKF54244.1
rRNA (guanine-N(2)-)-methyltransferase; COG0116 Predicted N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily.
 
     0.689
EKF55633.1
Hypothetical protein.
  
     0.677
EKF55400.1
Hypothetical protein.
  
     0.609
EKF56376.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.586
EKF56632.1
Hypothetical protein; COG4535 Putative Mg2+ and Co2+ transporter CorC.
  
     0.553
EKF55931.1
Gliding motility-associated protein GldC.
  
     0.533
EKF54243.1
Hypothetical protein.
       0.531
EKF54910.1
ABC transporter ATPase.
  
     0.519
EKF55671.1
Hypothetical protein.
  
     0.511
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.