STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF54151.1Hypothetical protein. (379 aa)    
Predicted Functional Partners:
EKF54143.1
COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
  
  0.971
EKF54146.1
Cupin; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
  0.931
EKF54152.1
COG0716 Flavodoxins.
 
     0.882
EKF54148.1
Hypothetical protein.
  
  0.872
EKF54144.1
Hypothetical protein; COG1073 Hydrolases of the alpha/beta superfamily.
 
 
  0.858
EKF54150.1
COG2311 Predicted membrane protein.
 
     0.728
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  0.680
EKF54673.1
CinA-like protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
    
  0.676
EKF54147.1
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
     0.658
EKF54153.1
COG2207 AraC-type DNA-binding domain-containing proteins.
       0.658
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.