STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKF53966.1Hypothetical protein; COG2608 Copper chaperone. (70 aa)    
Predicted Functional Partners:
EKF53967.1
Hypothetical protein; COG2217 Cation transport ATPase.
 
   0.924
EKF53965.1
COG3228 Uncharacterized protein conserved in bacteria; Belongs to the MtfA family.
 
     0.793
EKF54080.1
Copper-translocating P-type ATPase; COG2217 Cation transport ATPase.
 
   0.727
EKF55647.1
Superoxide dismutase copper/zinc binding protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.695
EKF55984.1
Heavy metal-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
   0.512
EKF55505.1
Copper-transporting ATPase, P-type (copB); COG2217 Cation transport ATPase.
  
   0.512
EKF54052.1
Cadmium transporting P-type ATPase; COG2217 Cation transport ATPase.
  
   0.512
EKF53991.1
Heavy metal-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
   0.512
EKF54589.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
   
   0.509
EKF53976.1
Regulatory protein; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.507
Your Current Organism:
Galbibacter marinus
NCBI taxonomy Id: 555500
Other names: CCTCC AB 209062, G. marinus, Galbibacter marinus Li et al. 2013, Galbibacter sp. ck-I2-15, LMG 25228, LMG:25228, MCCC 1A03044, strain ck-I2-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.