Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKF53845.1 | EKF53847.1 | I215_15467 | I215_15477 | Hypothetical protein. | COG3205 Predicted membrane protein. | 0.551 |
EKF53845.1 | EKF53849.1 | I215_15467 | I215_15487 | Hypothetical protein. | Sulfate adenylyltransferase subunit 2; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes. | 0.551 |
EKF53845.1 | EKF53850.1 | I215_15467 | I215_15492 | Hypothetical protein. | Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.512 |
EKF53845.1 | cysC | I215_15467 | I215_15482 | Hypothetical protein. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.551 |
EKF53845.1 | cysQ | I215_15467 | I215_15472 | Hypothetical protein. | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. | 0.551 |
EKF53847.1 | EKF53845.1 | I215_15477 | I215_15467 | COG3205 Predicted membrane protein. | Hypothetical protein. | 0.551 |
EKF53847.1 | EKF53849.1 | I215_15477 | I215_15487 | COG3205 Predicted membrane protein. | Sulfate adenylyltransferase subunit 2; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes. | 0.884 |
EKF53847.1 | EKF53850.1 | I215_15477 | I215_15492 | COG3205 Predicted membrane protein. | Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.863 |
EKF53847.1 | EKF54179.1 | I215_15477 | I215_13707 | COG3205 Predicted membrane protein. | Hypothetical protein. | 0.451 |
EKF53847.1 | EKF55533.1 | I215_15477 | I215_07482 | COG3205 Predicted membrane protein. | COG1538 Outer membrane protein. | 0.436 |
EKF53847.1 | EKF56030.1 | I215_15477 | I215_03765 | COG3205 Predicted membrane protein. | Hypothetical protein. | 0.410 |
EKF53847.1 | cysC | I215_15477 | I215_15482 | COG3205 Predicted membrane protein. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.953 |
EKF53847.1 | cysQ | I215_15477 | I215_15472 | COG3205 Predicted membrane protein. | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. | 0.908 |
EKF53849.1 | EKF53845.1 | I215_15487 | I215_15467 | Sulfate adenylyltransferase subunit 2; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes. | Hypothetical protein. | 0.551 |
EKF53849.1 | EKF53847.1 | I215_15487 | I215_15477 | Sulfate adenylyltransferase subunit 2; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes. | COG3205 Predicted membrane protein. | 0.884 |
EKF53849.1 | EKF53850.1 | I215_15487 | I215_15492 | Sulfate adenylyltransferase subunit 2; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes. | Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
EKF53849.1 | cysC | I215_15487 | I215_15482 | Sulfate adenylyltransferase subunit 2; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.998 |
EKF53849.1 | cysQ | I215_15487 | I215_15472 | Sulfate adenylyltransferase subunit 2; COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes. | 3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family. | 0.982 |
EKF53850.1 | EKF53845.1 | I215_15492 | I215_15467 | Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Hypothetical protein. | 0.512 |
EKF53850.1 | EKF53847.1 | I215_15492 | I215_15477 | Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | COG3205 Predicted membrane protein. | 0.863 |
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