STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI10132.1Hypothetical protein. (311 aa)    
Predicted Functional Partners:
SDI10120.1
Cation transport protein ChaC; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
       0.724
SDI10102.1
Hypothetical protein.
       0.650
SDI10190.1
Succinyl-diaminopimelate desuccinylase.
 
     0.645
SDI10160.1
Peptidase family M23.
       0.642
SDI10072.1
Chemotaxis protein MotB.
 
     0.610
SDJ13790.1
AsmA-like C-terminal region.
  
     0.540
SDI25168.1
L-amino acid N-acyltransferase YncA.
  
     0.462
SDI52590.1
Hypothetical protein.
  
     0.460
SDI24845.1
Hypothetical protein.
  
     0.457
SDI10043.1
Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family.
       0.445
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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