STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI23503.1Tellurite resistance protein TerB. (141 aa)    
Predicted Functional Partners:
SDJ56139.1
Tellurite resistance protein TerA.
  
  
 0.831
lysS
lysyl-tRNA synthetase, class I; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.713
SDI09347.1
Hypothetical protein.
  
     0.639
SDJ22447.1
Nucleoid-associated protein YgaU, contains BON and LysM domains.
  
     0.602
SDI80228.1
HemY protein.
  
     0.575
SDI23464.1
Protein of unknown function.
       0.535
SDI51701.1
Hypothetical protein.
  
     0.528
SDI10102.1
Hypothetical protein.
  
     0.521
SDJ15959.1
DnaJ like chaperone protein.
  
     0.519
SDJ49671.1
Outer membrane protein (porin).
  
     0.509
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.