Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI23804.1 | SDI23824.1 | SAMN04487993_1002192 | SAMN04487993_1002193 | Hypothetical protein. | SnoaL-like domain-containing protein. | 0.951 |
SDI23804.1 | SDI23845.1 | SAMN04487993_1002192 | SAMN04487993_1002194 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.696 |
SDI23804.1 | SDI55310.1 | SAMN04487993_1002192 | SAMN04487993_1006175 | Hypothetical protein. | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. | 0.839 |
SDI23804.1 | SDI55326.1 | SAMN04487993_1002192 | SAMN04487993_1006176 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.858 |
SDI23804.1 | SDI80618.1 | SAMN04487993_1002192 | SAMN04487993_1010113 | Hypothetical protein. | Acyl transferase domain-containing protein. | 0.876 |
SDI23804.1 | SDI91437.1 | SAMN04487993_1002192 | SAMN04487993_1012117 | Hypothetical protein. | Aryl carrier domain-containing protein. | 0.793 |
SDI23804.1 | SDJ13523.1 | SAMN04487993_1002192 | SAMN04487993_101943 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.858 |
SDI23804.1 | SDJ25562.1 | SAMN04487993_1002192 | SAMN04487993_102355 | Hypothetical protein. | Glutamate synthase (NADPH) large subunit. | 0.841 |
SDI23804.1 | fabH | SAMN04487993_1002192 | SAMN04487993_102668 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.797 |
SDI23804.1 | fabZ | SAMN04487993_1002192 | SAMN04487993_101379 | Hypothetical protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.835 |
SDI23824.1 | SDI23804.1 | SAMN04487993_1002193 | SAMN04487993_1002192 | SnoaL-like domain-containing protein. | Hypothetical protein. | 0.951 |
SDI23824.1 | SDI23845.1 | SAMN04487993_1002193 | SAMN04487993_1002194 | SnoaL-like domain-containing protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.712 |
SDI23845.1 | SDI23804.1 | SAMN04487993_1002194 | SAMN04487993_1002192 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.696 |
SDI23845.1 | SDI23824.1 | SAMN04487993_1002194 | SAMN04487993_1002193 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | SnoaL-like domain-containing protein. | 0.712 |
SDI55310.1 | SDI23804.1 | SAMN04487993_1006175 | SAMN04487993_1002192 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. | Hypothetical protein. | 0.839 |
SDI55310.1 | SDI55326.1 | SAMN04487993_1006175 | SAMN04487993_1006176 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. | 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.997 |
SDI55310.1 | SDI80618.1 | SAMN04487993_1006175 | SAMN04487993_1010113 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. | Acyl transferase domain-containing protein. | 0.828 |
SDI55310.1 | SDJ13523.1 | SAMN04487993_1006175 | SAMN04487993_101943 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.911 |
SDI55310.1 | fabH | SAMN04487993_1006175 | SAMN04487993_102668 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.906 |
SDI55310.1 | fabZ | SAMN04487993_1006175 | SAMN04487993_101379 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.930 |
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