STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI25692.13-oxoacyl-[acyl-carrier-protein] reductase. (240 aa)    
Predicted Functional Partners:
SDI89274.1
N-terminal half of MaoC dehydratase.
 
 
  0.912
SDJ48789.1
Polyhydroxyalkanoate synthase.
  
 
 0.907
SDI80618.1
Acyl transferase domain-containing protein.
  
 0.876
SDI25674.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  0.865
SDJ25562.1
Glutamate synthase (NADPH) large subunit.
     
 0.841
SDI21889.1
3-hydroxybutyryl-CoA dehydratase.
  
  0.832
SDI67911.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
  0.809
SDI12212.1
3-hydroxybutyryl-CoA dehydrogenase.
    
  0.799
SDI67949.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.798
SDI91437.1
Aryl carrier domain-containing protein.
  
 
 0.793
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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