STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI21668.11-Cys peroxiredoxin. (217 aa)    
Predicted Functional Partners:
SDI15328.1
Thiol-disulfide isomerase or thioredoxin.
  
 0.985
SDI85782.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
  
 0.985
SDJ07294.1
Thiol-disulfide isomerase or thioredoxin.
  
 0.985
SDI14102.1
Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
  
 0.972
SDI40143.1
Thioredoxin reductase.
  
 
 0.950
SDJ41424.1
Thioredoxin reductase (NADPH).
  
 
 0.950
SDJ37449.1
Catalase.
  
 
 0.902
SDI31321.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.845
SDI73272.1
ATP-dependent DNA helicase RecQ.
    
   0.831
SDI73299.1
ATP-dependent DNA helicase RecQ.
    
   0.831
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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