STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI35008.1Hypothetical protein. (727 aa)    
Predicted Functional Partners:
SDI34992.1
Two component transcriptional regulator, LuxR family.
 
 0.974
SDJ56995.1
PAS domain S-box-containing protein.
   
 0.948
SDJ44703.1
Signal transduction histidine kinase.
  
 0.918
SDJ17009.1
PAS domain S-box-containing protein.
  
 0.874
SDJ07049.1
Response regulator receiver domain-containing protein.
    
 0.857
SDI09389.1
PAS domain S-box-containing protein.
   
 0.855
SDJ35698.1
PAS domain S-box-containing protein.
    
 0.835
SDI66845.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
   
  0.825
SDJ07066.1
Two component transcriptional regulator, LuxR family.
 
 0.778
SDI20792.1
PAS domain S-box-containing protein.
   
 0.760
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.