STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI48681.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (257 aa)    
Predicted Functional Partners:
SDI80618.1
Acyl transferase domain-containing protein.
  
 0.876
SDJ25562.1
Glutamate synthase (NADPH) large subunit.
     
 0.841
SDI91437.1
Aryl carrier domain-containing protein.
  
 
 0.793
SDJ19759.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.737
SDI48704.1
L-fuculose-phosphate aldolase.
    
  0.687
SDI80664.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.636
SDJ14435.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.635
SDJ32951.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.625
SDI91420.1
Enterobactin synthetase component F; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.615
SDI55326.1
3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
  0.612
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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