Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI12589.1 | SDI32964.1 | SAMN04487993_1001160 | SAMN04487993_1003174 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.709 |
SDI12589.1 | SDI51701.1 | SAMN04487993_1001160 | SAMN04487993_100613 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.669 |
SDI12589.1 | SDI53020.1 | SAMN04487993_1001160 | SAMN04487993_100670 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.696 |
SDI12589.1 | SDJ14622.1 | SAMN04487993_1001160 | SAMN04487993_101990 | DNA polymerase III, delta subunit. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.713 |
SDI12589.1 | SDJ41471.1 | SAMN04487993_1001160 | SAMN04487993_103036 | DNA polymerase III, delta subunit. | Hypothetical protein. | 0.601 |
SDI12589.1 | SDJ41760.1 | SAMN04487993_1001160 | SAMN04487993_103049 | DNA polymerase III, delta subunit. | SseB protein N-terminal domain-containing protein. | 0.706 |
SDI20397.1 | SDI23520.1 | SAMN04487993_100214 | SAMN04487993_1002178 | Rod shape-determining protein MreC. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.565 |
SDI20397.1 | SDI32964.1 | SAMN04487993_100214 | SAMN04487993_1003174 | Rod shape-determining protein MreC. | Hypothetical protein. | 0.442 |
SDI20397.1 | SDI51701.1 | SAMN04487993_100214 | SAMN04487993_100613 | Rod shape-determining protein MreC. | Hypothetical protein. | 0.733 |
SDI20397.1 | SDJ14622.1 | SAMN04487993_100214 | SAMN04487993_101990 | Rod shape-determining protein MreC. | Protein RodZ, contains Xre-like HTH and DUF4115 domains. | 0.780 |
SDI20397.1 | SDJ41471.1 | SAMN04487993_100214 | SAMN04487993_103036 | Rod shape-determining protein MreC. | Hypothetical protein. | 0.474 |
SDI23520.1 | SDI20397.1 | SAMN04487993_1002178 | SAMN04487993_100214 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Rod shape-determining protein MreC. | 0.565 |
SDI23520.1 | SDI32964.1 | SAMN04487993_1002178 | SAMN04487993_1003174 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Hypothetical protein. | 0.689 |
SDI23520.1 | SDI51701.1 | SAMN04487993_1002178 | SAMN04487993_100613 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Hypothetical protein. | 0.655 |
SDI23520.1 | SDI53020.1 | SAMN04487993_1002178 | SAMN04487993_100670 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Hypothetical protein. | 0.538 |
SDI23520.1 | SDJ41760.1 | SAMN04487993_1002178 | SAMN04487993_103049 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | SseB protein N-terminal domain-containing protein. | 0.629 |
SDI32964.1 | SDI12589.1 | SAMN04487993_1003174 | SAMN04487993_1001160 | Hypothetical protein. | DNA polymerase III, delta subunit. | 0.709 |
SDI32964.1 | SDI20397.1 | SAMN04487993_1003174 | SAMN04487993_100214 | Hypothetical protein. | Rod shape-determining protein MreC. | 0.442 |
SDI32964.1 | SDI23520.1 | SAMN04487993_1003174 | SAMN04487993_1002178 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.689 |
SDI32964.1 | SDI51701.1 | SAMN04487993_1003174 | SAMN04487993_100613 | Hypothetical protein. | Hypothetical protein. | 0.692 |
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