Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI63416.1 | SDI63440.1 | SAMN04487993_1007199 | SAMN04487993_1007200 | Hypothetical protein. | Glycine/D-amino acid oxidase. | 0.760 |
SDI63416.1 | SDI63454.1 | SAMN04487993_1007199 | SAMN04487993_1007201 | Hypothetical protein. | 2-haloacid dehalogenase. | 0.774 |
SDI63416.1 | SDI63503.1 | SAMN04487993_1007199 | SAMN04487993_1007204 | Hypothetical protein. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.717 |
SDI63416.1 | SDI63517.1 | SAMN04487993_1007199 | SAMN04487993_1007205 | Hypothetical protein. | Glyoxylate/hydroxypyruvate reductase A. | 0.735 |
SDI63416.1 | SDI63555.1 | SAMN04487993_1007199 | SAMN04487993_1007207 | Hypothetical protein. | Glycine/D-amino acid oxidase. | 0.745 |
SDI63416.1 | SDJ03355.1 | SAMN04487993_1007199 | SAMN04487993_101593 | Hypothetical protein. | Putative hydrolase of the HAD superfamily. | 0.708 |
SDI63440.1 | SDI63416.1 | SAMN04487993_1007200 | SAMN04487993_1007199 | Glycine/D-amino acid oxidase. | Hypothetical protein. | 0.760 |
SDI63440.1 | SDI63454.1 | SAMN04487993_1007200 | SAMN04487993_1007201 | Glycine/D-amino acid oxidase. | 2-haloacid dehalogenase. | 0.944 |
SDI63440.1 | SDI63485.1 | SAMN04487993_1007200 | SAMN04487993_1007203 | Glycine/D-amino acid oxidase. | Acetyltransferase (GNAT) family protein. | 0.827 |
SDI63440.1 | SDI63503.1 | SAMN04487993_1007200 | SAMN04487993_1007204 | Glycine/D-amino acid oxidase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.826 |
SDI63440.1 | SDI63517.1 | SAMN04487993_1007200 | SAMN04487993_1007205 | Glycine/D-amino acid oxidase. | Glyoxylate/hydroxypyruvate reductase A. | 0.782 |
SDI63440.1 | SDJ03355.1 | SAMN04487993_1007200 | SAMN04487993_101593 | Glycine/D-amino acid oxidase. | Putative hydrolase of the HAD superfamily. | 0.609 |
SDI63454.1 | SDI63416.1 | SAMN04487993_1007201 | SAMN04487993_1007199 | 2-haloacid dehalogenase. | Hypothetical protein. | 0.774 |
SDI63454.1 | SDI63440.1 | SAMN04487993_1007201 | SAMN04487993_1007200 | 2-haloacid dehalogenase. | Glycine/D-amino acid oxidase. | 0.944 |
SDI63454.1 | SDI63485.1 | SAMN04487993_1007201 | SAMN04487993_1007203 | 2-haloacid dehalogenase. | Acetyltransferase (GNAT) family protein. | 0.845 |
SDI63454.1 | SDI63503.1 | SAMN04487993_1007201 | SAMN04487993_1007204 | 2-haloacid dehalogenase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.789 |
SDI63454.1 | SDI63517.1 | SAMN04487993_1007201 | SAMN04487993_1007205 | 2-haloacid dehalogenase. | Glyoxylate/hydroxypyruvate reductase A. | 0.812 |
SDI63454.1 | SDI63555.1 | SAMN04487993_1007201 | SAMN04487993_1007207 | 2-haloacid dehalogenase. | Glycine/D-amino acid oxidase. | 0.766 |
SDI63454.1 | SDI69331.1 | SAMN04487993_1007201 | SAMN04487993_1008161 | 2-haloacid dehalogenase. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.828 |
SDI63454.1 | SDI69341.1 | SAMN04487993_1007201 | SAMN04487993_1008162 | 2-haloacid dehalogenase. | Predicted extracellular nuclease. | 0.787 |
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