STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI60027.1Spermidine/putrescine transport system substrate-binding protein. (344 aa)    
Predicted Functional Partners:
SDI60103.1
Spermidine/putrescine transport system permease protein.
 
  0.944
SDI60078.1
Spermidine/putrescine transport system permease protein.
 
 
  0.943
SDI60204.1
Spermidine/putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
  
  
 
0.928
SDI12324.1
Spermidine/putrescine transport system permease protein.
 
  0.918
SDI81902.1
Putrescine transport system permease protein.
 
  0.909
SDI60280.1
Spermidine/putrescine transport system permease protein.
 
  0.908
SDJ20298.1
Spermidine/putrescine transport system permease protein.
 
  0.903
SDI12338.1
Spermidine/putrescine transport system permease protein.
 
 
  0.900
SDI60246.1
Spermidine/putrescine transport system permease protein.
 
 
  0.900
SDI55630.1
Putative spermidine/putrescine transport system permease protein.
 
 
  0.897
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.