STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI60363.1Peptide/nickel transport system substrate-binding protein. (525 aa)    
Predicted Functional Partners:
SDI60382.1
Peptide/nickel transport system permease protein.
 
  0.905
SDI60406.1
Peptide/nickel transport system permease protein.
 
  0.900
SDI60469.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.810
SDI60444.1
Cytosine/adenosine deaminase.
 
     0.797
SDI60485.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.772
SDI60424.1
Cytosine/adenosine deaminase.
 
     0.758
SDI39693.1
Peptide/nickel transport system permease protein.
  
  0.746
SDI39704.1
Peptide/nickel transport system permease protein.
  
  0.732
SDI60341.1
Transcriptional regulator, GntR family.
 
     0.681
SDJ20041.1
Peptide/nickel transport system permease protein.
  
  0.677
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.