STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI59356.1Dihydroxyacetone kinase, C-terminal domain. (208 aa)    
Predicted Functional Partners:
SDI59331.1
Dihydroxyacetone kinase, N-terminal domain.
 0.999
SDI48801.1
Dihydroxyacetone kinase.
 
0.995
SDI59302.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.812
SDI59244.1
Simple sugar transport system substrate-binding protein.
 
     0.789
SDI59273.1
Simple sugar transport system ATP-binding protein.
       0.773
SDJ08116.1
Glycerol dehydrogenase.
  
 
 0.687
SDI59232.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.594
SDI59369.1
Transcriptional regulator, DeoR family.
 
     0.520
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.511
SDI12193.1
Phosphocarrier protein.
  
 
 0.491
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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