STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI70429.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
SDI70403.1
Hypothetical protein.
       0.675
SDI70505.1
Hypothetical protein.
       0.597
SDI70523.1
Hypothetical protein.
       0.577
SDI70439.1
Hypothetical protein.
       0.563
SDI70464.1
Hypothetical protein.
       0.563
SDI70481.1
Phage Tail Collar Domain.
       0.563
SDI70539.1
Hypothetical protein.
       0.563
SDI70559.1
Cell Wall Hydrolase.
       0.563
SDI70584.1
Type III restriction enzyme, res subunit.
       0.563
SDI70603.1
Hypothetical protein.
       0.563
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.