Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI25235.1 | SDI42727.1 | SAMN04487993_1002269 | SAMN04487993_1004257 | 2,4-dienoyl-CoA reductase (NADPH2). | Ferredoxin-NADP reductase. | 0.891 |
SDI25235.1 | SDI46531.1 | SAMN04487993_1002269 | SAMN04487993_100560 | 2,4-dienoyl-CoA reductase (NADPH2). | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | 0.891 |
SDI25235.1 | SDI52745.1 | SAMN04487993_1002269 | SAMN04487993_100660 | 2,4-dienoyl-CoA reductase (NADPH2). | Alkane 1-monooxygenase. | 0.692 |
SDI25235.1 | SDI73161.1 | SAMN04487993_1002269 | SAMN04487993_100952 | 2,4-dienoyl-CoA reductase (NADPH2). | Alkane 1-monooxygenase. | 0.716 |
SDI25235.1 | SDJ10135.1 | SAMN04487993_1002269 | SAMN04487993_101815 | 2,4-dienoyl-CoA reductase (NADPH2). | Phthalate 4,5-dioxygenase, reductase subunit. | 0.886 |
SDI25235.1 | SDJ18916.1 | SAMN04487993_1002269 | SAMN04487993_102116 | 2,4-dienoyl-CoA reductase (NADPH2). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.891 |
SDI25235.1 | SDJ43325.1 | SAMN04487993_1002269 | SAMN04487993_103133 | 2,4-dienoyl-CoA reductase (NADPH2). | Alcohol dehydrogenase. | 0.412 |
SDI26304.1 | SDI52745.1 | SAMN04487993_1002332 | SAMN04487993_100660 | ABC-type polysaccharide/polyol phosphate export permease. | Alkane 1-monooxygenase. | 0.626 |
SDI26304.1 | SDI73161.1 | SAMN04487993_1002332 | SAMN04487993_100952 | ABC-type polysaccharide/polyol phosphate export permease. | Alkane 1-monooxygenase. | 0.572 |
SDI26304.1 | SDI94145.1 | SAMN04487993_1002332 | SAMN04487993_101329 | ABC-type polysaccharide/polyol phosphate export permease. | Hypothetical protein. | 0.758 |
SDI42727.1 | SDI25235.1 | SAMN04487993_1004257 | SAMN04487993_1002269 | Ferredoxin-NADP reductase. | 2,4-dienoyl-CoA reductase (NADPH2). | 0.891 |
SDI42727.1 | SDI46531.1 | SAMN04487993_1004257 | SAMN04487993_100560 | Ferredoxin-NADP reductase. | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | 0.591 |
SDI42727.1 | SDI52745.1 | SAMN04487993_1004257 | SAMN04487993_100660 | Ferredoxin-NADP reductase. | Alkane 1-monooxygenase. | 0.806 |
SDI42727.1 | SDI73161.1 | SAMN04487993_1004257 | SAMN04487993_100952 | Ferredoxin-NADP reductase. | Alkane 1-monooxygenase. | 0.806 |
SDI42727.1 | SDJ10135.1 | SAMN04487993_1004257 | SAMN04487993_101815 | Ferredoxin-NADP reductase. | Phthalate 4,5-dioxygenase, reductase subunit. | 0.615 |
SDI42727.1 | SDJ18916.1 | SAMN04487993_1004257 | SAMN04487993_102116 | Ferredoxin-NADP reductase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.625 |
SDI42727.1 | SDJ43325.1 | SAMN04487993_1004257 | SAMN04487993_103133 | Ferredoxin-NADP reductase. | Alcohol dehydrogenase. | 0.752 |
SDI46531.1 | SDI25235.1 | SAMN04487993_100560 | SAMN04487993_1002269 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | 2,4-dienoyl-CoA reductase (NADPH2). | 0.891 |
SDI46531.1 | SDI42727.1 | SAMN04487993_100560 | SAMN04487993_1004257 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | Ferredoxin-NADP reductase. | 0.591 |
SDI46531.1 | SDI52745.1 | SAMN04487993_100560 | SAMN04487993_100660 | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | Alkane 1-monooxygenase. | 0.806 |
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