STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI73427.1Carbon-monoxide dehydrogenase medium subunit. (277 aa)    
Predicted Functional Partners:
SDI73401.1
Carbon-monoxide dehydrogenase small subunit.
 0.993
SDI31752.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 
 0.989
SDI73378.1
Carbon-monoxide dehydrogenase large subunit.
 
 0.987
SDI62995.1
Carbon-monoxide dehydrogenase large subunit.
 
 0.947
SDI74439.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.944
SDI99220.1
Carbon-monoxide dehydrogenase large subunit.
 
 0.943
SDI74423.1
Carbon-monoxide dehydrogenase small subunit.
 0.936
SDI63015.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
 0.906
SDI40543.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 
 0.897
SDI62941.1
Carbon-monoxide dehydrogenase small subunit.
  0.887
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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