Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI21567.1 | SDI48956.1 | SAMN04487993_100276 | SAMN04487993_1005195 | fatty-acyl-CoA synthase. | Fatty-acid peroxygenase. | 0.604 |
SDI21567.1 | SDI78488.1 | SAMN04487993_100276 | SAMN04487993_101014 | fatty-acyl-CoA synthase. | Exopolysaccharide biosynthesis protein YbjH. | 0.625 |
SDI21567.1 | SDI94125.1 | SAMN04487993_100276 | SAMN04487993_101328 | fatty-acyl-CoA synthase. | Cytochrome P450. | 0.604 |
SDI21567.1 | SDJ30470.1 | SAMN04487993_100276 | SAMN04487993_102542 | fatty-acyl-CoA synthase. | Hypothetical protein; Belongs to the cytochrome P450 family. | 0.604 |
SDI21567.1 | SDJ34622.1 | SAMN04487993_100276 | SAMN04487993_10279 | fatty-acyl-CoA synthase. | Fatty-acid peroxygenase. | 0.604 |
SDI21567.1 | SDJ57916.1 | SAMN04487993_100276 | SAMN04487993_10537 | fatty-acyl-CoA synthase. | Cytochrome P450. | 0.604 |
SDI21567.1 | rplF | SAMN04487993_100276 | SAMN04487993_1002230 | fatty-acyl-CoA synthase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.864 |
SDI42685.1 | SDI48956.1 | SAMN04487993_1004254 | SAMN04487993_1005195 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Fatty-acid peroxygenase. | 0.604 |
SDI42685.1 | SDI78488.1 | SAMN04487993_1004254 | SAMN04487993_101014 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Exopolysaccharide biosynthesis protein YbjH. | 0.625 |
SDI42685.1 | SDI94125.1 | SAMN04487993_1004254 | SAMN04487993_101328 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Cytochrome P450. | 0.604 |
SDI42685.1 | SDJ30470.1 | SAMN04487993_1004254 | SAMN04487993_102542 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Hypothetical protein; Belongs to the cytochrome P450 family. | 0.655 |
SDI42685.1 | SDJ34622.1 | SAMN04487993_1004254 | SAMN04487993_10279 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Fatty-acid peroxygenase. | 0.604 |
SDI42685.1 | SDJ57916.1 | SAMN04487993_1004254 | SAMN04487993_10537 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Cytochrome P450. | 0.604 |
SDI42685.1 | rplF | SAMN04487993_1004254 | SAMN04487993_1002230 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.844 |
SDI48956.1 | SDI21567.1 | SAMN04487993_1005195 | SAMN04487993_100276 | Fatty-acid peroxygenase. | fatty-acyl-CoA synthase. | 0.604 |
SDI48956.1 | SDI42685.1 | SAMN04487993_1005195 | SAMN04487993_1004254 | Fatty-acid peroxygenase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.604 |
SDI48956.1 | SDI78488.1 | SAMN04487993_1005195 | SAMN04487993_101014 | Fatty-acid peroxygenase. | Exopolysaccharide biosynthesis protein YbjH. | 0.701 |
SDI48956.1 | rplF | SAMN04487993_1005195 | SAMN04487993_1002230 | Fatty-acid peroxygenase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.845 |
SDI78488.1 | SDI21567.1 | SAMN04487993_101014 | SAMN04487993_100276 | Exopolysaccharide biosynthesis protein YbjH. | fatty-acyl-CoA synthase. | 0.625 |
SDI78488.1 | SDI42685.1 | SAMN04487993_101014 | SAMN04487993_1004254 | Exopolysaccharide biosynthesis protein YbjH. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.625 |
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