STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI91515.1Outer membrane transport energization protein ExbD. (130 aa)    
Predicted Functional Partners:
SDI91498.1
Outer membrane transport energization protein ExbB.
 
 
 0.998
SDI91553.1
Outer membrane transport energization protein TonB.
 
 
 0.998
SDI91477.1
Hypothetical protein.
 
     0.966
SDI91537.1
Biopolymer transport protein ExbD.
 
     0.966
tolQ
Cell division and transport-associated protein TolQ (TC 2.C.1.2.1); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.950
SDJ28160.1
Hypothetical protein.
  
 
 0.948
SDI86500.1
Hemoglobin/transferrin/lactoferrin receptor protein.
 
  
 0.801
hmuV
Iron complex transport system ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
   
 0.745
SDI86532.1
Putative hemin transport protein.
 
   
 0.720
SDI86558.1
Iron complex transport system substrate-binding protein.
 
  
 0.698
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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