STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI89274.1N-terminal half of MaoC dehydratase. (287 aa)    
Predicted Functional Partners:
SDI89128.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  0.986
SDI89213.1
Hypothetical protein.
 
   0.972
SDI89235.1
Acetyl-CoA acetyltransferase.
 
  0.962
SDI89299.1
Enoyl-CoA hydratase/carnithine racemase.
  
  0.921
SDI25692.1
3-oxoacyl-[acyl-carrier-protein] reductase.
 
 
  0.912
SDJ14456.1
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.912
SDI89255.1
6-carboxyhexanoate-CoA ligase.
 
 
  0.896
SDI94963.1
3-hydroxybutyrate dehydrogenase.
 
 
  0.893
SDI80618.1
Acyl transferase domain-containing protein.
    
 0.869
SDI89330.1
Hypothetical protein.
 
     0.814
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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