STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI89792.1FAD/FMN-containing dehydrogenase. (460 aa)    
Predicted Functional Partners:
SDI89770.1
NitT/TauT family transport system substrate-binding protein.
 
     0.944
SDI89874.1
Creatinine amidohydrolase.
     0.944
SDI89816.1
Cytosine deaminase.
 
     0.938
SDI89834.1
NitT/TauT family transport system permease protein.
 
     0.937
SDI89851.1
NitT/TauT family transport system ATP-binding protein.
 
     0.913
SDI89726.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
 
     0.827
SDJ25562.1
Glutamate synthase (NADPH) large subunit.
    
 0.807
SDI81466.1
Glycolate oxidase FAD binding subunit.
 
  
  0.750
SDI81485.1
Glycolate oxidase iron-sulfur subunit.
 
 
 0.743
SDJ32951.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.738
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.