STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI93832.1Two-component system, NtrC family, nitrogen regulation response regulator GlnG. (456 aa)    
Predicted Functional Partners:
SDI93817.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
 0.997
SDJ56995.1
PAS domain S-box-containing protein.
  
 0.975
SDJ07049.1
Response regulator receiver domain-containing protein.
 
 0.968
SDI66845.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
  
 0.947
SDJ44703.1
Signal transduction histidine kinase.
 
 0.945
SDJ52107.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.937
SDJ17009.1
PAS domain S-box-containing protein.
  
 0.927
SDI61338.1
PAS domain-containing protein.
  
 0.923
SDI93860.1
PAS/PAC sensor signal transduction histidine kinase.
 
 0.916
SDJ35698.1
PAS domain S-box-containing protein.
 
 0.912
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.