STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI99987.1Capsular polysaccharide export protein. (675 aa)    
Predicted Functional Partners:
SDJ00011.1
Polysaccharide export outer membrane protein.
 
  
 0.980
SDJ04594.1
Capsular polysaccharide transport system permease protein.
 
  
 0.963
SDJ00025.1
Capsular polysaccharide export protein.
   
 0.962
SDJ41843.1
Capsular polysaccharide transport system permease protein.
 
  
 0.961
SDJ41826.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.960
SDI26304.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.959
SDJ04650.1
Capsular polysaccharide transport system permease protein.
 
  
 0.954
SDJ04611.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
  
 0.935
SDI78549.1
Polysaccharide export outer membrane protein.
 
  
 0.847
SDI26426.1
Glycosyl transferase family 2.
  
    0.771
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.