Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI09347.1 | SDI98102.1 | SAMN04487993_10015 | SAMN04487993_101416 | Hypothetical protein. | Transcriptional regulator, MarR family. | 0.713 |
SDI33926.1 | SDI79468.1 | SAMN04487993_1003224 | SAMN04487993_101063 | Diguanylate cyclase (GGDEF) domain-containing protein. | comF family protein. | 0.520 |
SDI33926.1 | SDI98102.1 | SAMN04487993_1003224 | SAMN04487993_101416 | Diguanylate cyclase (GGDEF) domain-containing protein. | Transcriptional regulator, MarR family. | 0.652 |
SDI33926.1 | SDJ48937.1 | SAMN04487993_1003224 | SAMN04487993_103613 | Diguanylate cyclase (GGDEF) domain-containing protein. | DNA protecting protein DprA. | 0.445 |
SDI33926.1 | SDJ62106.1 | SAMN04487993_1003224 | SAMN04487993_10751 | Diguanylate cyclase (GGDEF) domain-containing protein. | DNA processing protein. | 0.445 |
SDI33926.1 | flgH | SAMN04487993_1003224 | SAMN04487993_104417 | Diguanylate cyclase (GGDEF) domain-containing protein. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.575 |
SDI33926.1 | fliP | SAMN04487993_1003224 | SAMN04487993_1001307 | Diguanylate cyclase (GGDEF) domain-containing protein. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.856 |
SDI79468.1 | SDI33926.1 | SAMN04487993_101063 | SAMN04487993_1003224 | comF family protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.520 |
SDI79468.1 | SDI98102.1 | SAMN04487993_101063 | SAMN04487993_101416 | comF family protein. | Transcriptional regulator, MarR family. | 0.761 |
SDI79468.1 | SDJ48937.1 | SAMN04487993_101063 | SAMN04487993_103613 | comF family protein. | DNA protecting protein DprA. | 0.863 |
SDI79468.1 | SDJ62106.1 | SAMN04487993_101063 | SAMN04487993_10751 | comF family protein. | DNA processing protein. | 0.836 |
SDI79468.1 | flgH | SAMN04487993_101063 | SAMN04487993_104417 | comF family protein. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.612 |
SDI79468.1 | fliP | SAMN04487993_101063 | SAMN04487993_1001307 | comF family protein. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.809 |
SDI79992.1 | SDI98102.1 | SAMN04487993_101084 | SAMN04487993_101416 | Hypothetical protein. | Transcriptional regulator, MarR family. | 0.649 |
SDI79992.1 | SDI98120.1 | SAMN04487993_101084 | SAMN04487993_101417 | Hypothetical protein. | Antitoxin CptB. | 0.453 |
SDI98102.1 | SDI09347.1 | SAMN04487993_101416 | SAMN04487993_10015 | Transcriptional regulator, MarR family. | Hypothetical protein. | 0.713 |
SDI98102.1 | SDI33926.1 | SAMN04487993_101416 | SAMN04487993_1003224 | Transcriptional regulator, MarR family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.652 |
SDI98102.1 | SDI79468.1 | SAMN04487993_101416 | SAMN04487993_101063 | Transcriptional regulator, MarR family. | comF family protein. | 0.761 |
SDI98102.1 | SDI79992.1 | SAMN04487993_101416 | SAMN04487993_101084 | Transcriptional regulator, MarR family. | Hypothetical protein. | 0.649 |
SDI98102.1 | SDI98120.1 | SAMN04487993_101416 | SAMN04487993_101417 | Transcriptional regulator, MarR family. | Antitoxin CptB. | 0.803 |
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