Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI12167.1 | SDI40072.1 | SAMN04487993_1001137 | SAMN04487993_1004106 | PTS system, mannose-specific IIA component. | Glucosamine-6-phosphate deaminase. | 0.737 |
SDI12167.1 | SDI40098.1 | SAMN04487993_1001137 | SAMN04487993_1004107 | PTS system, mannose-specific IIA component. | N-acetylglucosamine-6-phosphate deacetylase. | 0.615 |
SDI12167.1 | SDI55754.1 | SAMN04487993_1001137 | SAMN04487993_1006196 | PTS system, mannose-specific IIA component. | N-acetylglucosamine-6-phosphate deacetylase. | 0.566 |
SDI12167.1 | SDJ04790.1 | SAMN04487993_1001137 | SAMN04487993_101619 | PTS system, mannose-specific IIA component. | Phosphomannomutase. | 0.784 |
SDI12167.1 | SDJ05519.1 | SAMN04487993_1001137 | SAMN04487993_101658 | PTS system, mannose-specific IIA component. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.897 |
SDI13164.1 | SDJ04790.1 | SAMN04487993_1001187 | SAMN04487993_101619 | Lytic murein transglycosylase. | Phosphomannomutase. | 0.727 |
SDI40072.1 | SDI12167.1 | SAMN04487993_1004106 | SAMN04487993_1001137 | Glucosamine-6-phosphate deaminase. | PTS system, mannose-specific IIA component. | 0.737 |
SDI40072.1 | SDI40098.1 | SAMN04487993_1004106 | SAMN04487993_1004107 | Glucosamine-6-phosphate deaminase. | N-acetylglucosamine-6-phosphate deacetylase. | 0.999 |
SDI40072.1 | SDI55754.1 | SAMN04487993_1004106 | SAMN04487993_1006196 | Glucosamine-6-phosphate deaminase. | N-acetylglucosamine-6-phosphate deacetylase. | 0.993 |
SDI40072.1 | SDI73985.1 | SAMN04487993_1004106 | SAMN04487993_100993 | Glucosamine-6-phosphate deaminase. | Phosphoglucomutase. | 0.611 |
SDI40072.1 | SDJ04790.1 | SAMN04487993_1004106 | SAMN04487993_101619 | Glucosamine-6-phosphate deaminase. | Phosphomannomutase. | 0.707 |
SDI40072.1 | SDJ05519.1 | SAMN04487993_1004106 | SAMN04487993_101658 | Glucosamine-6-phosphate deaminase. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.857 |
SDI40072.1 | glmS | SAMN04487993_1004106 | SAMN04487993_101168 | Glucosamine-6-phosphate deaminase. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.862 |
SDI40098.1 | SDI12167.1 | SAMN04487993_1004107 | SAMN04487993_1001137 | N-acetylglucosamine-6-phosphate deacetylase. | PTS system, mannose-specific IIA component. | 0.615 |
SDI40098.1 | SDI40072.1 | SAMN04487993_1004107 | SAMN04487993_1004106 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate deaminase. | 0.999 |
SDI40098.1 | SDJ04790.1 | SAMN04487993_1004107 | SAMN04487993_101619 | N-acetylglucosamine-6-phosphate deacetylase. | Phosphomannomutase. | 0.631 |
SDI40098.1 | glmS | SAMN04487993_1004107 | SAMN04487993_101168 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.836 |
SDI55754.1 | SDI12167.1 | SAMN04487993_1006196 | SAMN04487993_1001137 | N-acetylglucosamine-6-phosphate deacetylase. | PTS system, mannose-specific IIA component. | 0.566 |
SDI55754.1 | SDI40072.1 | SAMN04487993_1006196 | SAMN04487993_1004106 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate deaminase. | 0.993 |
SDI55754.1 | SDJ04790.1 | SAMN04487993_1006196 | SAMN04487993_101619 | N-acetylglucosamine-6-phosphate deacetylase. | Phosphomannomutase. | 0.631 |
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