Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI20917.1 | SDI20933.1 | SAMN04487993_100241 | SAMN04487993_100242 | Allophanate hydrolase. | Sensor histidine kinase inhibitor, KipI family. | 0.999 |
SDI20917.1 | SDJ10292.1 | SAMN04487993_100241 | SAMN04487993_101823 | Allophanate hydrolase. | Transcriptional regulator, IclR family. | 0.529 |
SDI20933.1 | SDI20917.1 | SAMN04487993_100242 | SAMN04487993_100241 | Sensor histidine kinase inhibitor, KipI family. | Allophanate hydrolase. | 0.999 |
SDI20933.1 | SDJ10292.1 | SAMN04487993_100242 | SAMN04487993_101823 | Sensor histidine kinase inhibitor, KipI family. | Transcriptional regulator, IclR family. | 0.535 |
SDJ10274.1 | SDJ10292.1 | SAMN04487993_101822 | SAMN04487993_101823 | Nicotinamidase-related amidase. | Transcriptional regulator, IclR family. | 0.768 |
SDJ10274.1 | SDJ10311.1 | SAMN04487993_101822 | SAMN04487993_101824 | Nicotinamidase-related amidase. | Hypothetical protein. | 0.544 |
SDJ10292.1 | SDI20917.1 | SAMN04487993_101823 | SAMN04487993_100241 | Transcriptional regulator, IclR family. | Allophanate hydrolase. | 0.529 |
SDJ10292.1 | SDI20933.1 | SAMN04487993_101823 | SAMN04487993_100242 | Transcriptional regulator, IclR family. | Sensor histidine kinase inhibitor, KipI family. | 0.535 |
SDJ10292.1 | SDJ10274.1 | SAMN04487993_101823 | SAMN04487993_101822 | Transcriptional regulator, IclR family. | Nicotinamidase-related amidase. | 0.768 |
SDJ10292.1 | SDJ10311.1 | SAMN04487993_101823 | SAMN04487993_101824 | Transcriptional regulator, IclR family. | Hypothetical protein. | 0.548 |
SDJ10311.1 | SDJ10274.1 | SAMN04487993_101824 | SAMN04487993_101822 | Hypothetical protein. | Nicotinamidase-related amidase. | 0.544 |
SDJ10311.1 | SDJ10292.1 | SAMN04487993_101824 | SAMN04487993_101823 | Hypothetical protein. | Transcriptional regulator, IclR family. | 0.548 |