Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI48924.1 | SDI80618.1 | SAMN04487993_1005193 | SAMN04487993_1010113 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Acyl transferase domain-containing protein. | 0.876 |
SDI48924.1 | SDI91420.1 | SAMN04487993_1005193 | SAMN04487993_1012116 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Enterobactin synthetase component F; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.898 |
SDI48924.1 | SDJ13432.1 | SAMN04487993_1005193 | SAMN04487993_101939 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | NADPH:quinone reductase. | 0.443 |
SDI48924.1 | SDJ18956.1 | SAMN04487993_1005193 | SAMN04487993_102118 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. | 0.462 |
SDI59906.1 | SDI67911.1 | SAMN04487993_100734 | SAMN04487993_100879 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.894 |
SDI59906.1 | SDI80618.1 | SAMN04487993_100734 | SAMN04487993_1010113 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acyl transferase domain-containing protein. | 0.920 |
SDI59906.1 | SDI91420.1 | SAMN04487993_100734 | SAMN04487993_1012116 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enterobactin synthetase component F; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.754 |
SDI59906.1 | SDJ13432.1 | SAMN04487993_100734 | SAMN04487993_101939 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | NADPH:quinone reductase. | 0.545 |
SDI59906.1 | SDJ18956.1 | SAMN04487993_100734 | SAMN04487993_102118 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. | 0.922 |
SDI59906.1 | SDJ19166.1 | SAMN04487993_100734 | SAMN04487993_102129 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Short chain enoyl-CoA hydratase. | 0.668 |
SDI59906.1 | SDJ43325.1 | SAMN04487993_100734 | SAMN04487993_103133 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | Alcohol dehydrogenase. | 0.746 |
SDI67911.1 | SDI59906.1 | SAMN04487993_100879 | SAMN04487993_100734 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.894 |
SDI67911.1 | SDI80618.1 | SAMN04487993_100879 | SAMN04487993_1010113 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Acyl transferase domain-containing protein. | 0.920 |
SDI67911.1 | SDI91420.1 | SAMN04487993_100879 | SAMN04487993_1012116 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Enterobactin synthetase component F; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.754 |
SDI67911.1 | SDJ13432.1 | SAMN04487993_100879 | SAMN04487993_101939 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | NADPH:quinone reductase. | 0.539 |
SDI67911.1 | SDJ18956.1 | SAMN04487993_100879 | SAMN04487993_102118 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. | 0.922 |
SDI67911.1 | SDJ19166.1 | SAMN04487993_100879 | SAMN04487993_102129 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Short chain enoyl-CoA hydratase. | 0.896 |
SDI67911.1 | SDJ43325.1 | SAMN04487993_100879 | SAMN04487993_103133 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | Alcohol dehydrogenase. | 0.741 |
SDI80618.1 | SDI48924.1 | SAMN04487993_1010113 | SAMN04487993_1005193 | Acyl transferase domain-containing protein. | NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.876 |
SDI80618.1 | SDI59906.1 | SAMN04487993_1010113 | SAMN04487993_100734 | Acyl transferase domain-containing protein. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.920 |
page 1 of 4