STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ21557.1Head-tail adaptor. (110 aa)    
Predicted Functional Partners:
SDI95905.1
Phage conserved hypothetical protein, phiE125 gp8 family.
  
 
 0.933
SDI95882.1
Protein of unknown function.
   
   0.925
SDI23446.1
Pectate lyase superfamily protein.
  
 
 0.899
SDJ21637.1
Phage major capsid protein, HK97 family.
  
 
 0.839
SDJ21540.1
Bacteriophage HK97-gp10, putative tail-component.
  
    0.816
SDJ21485.1
Hypothetical protein.
       0.800
SDJ21512.1
Hypothetical protein.
       0.794
SDJ21579.1
Hypothetical protein.
       0.792
SDI95810.1
Phage major tail protein, TP901-1 family.
   
   0.784
SDJ21622.1
Hypothetical protein.
       0.779
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.