Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI21783.1 | SDI40923.1 | SAMN04487993_100289 | SAMN04487993_1004154 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Malic enzyme. | 0.762 |
SDI21783.1 | SDI40930.1 | SAMN04487993_100289 | SAMN04487993_1004155 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Phosphotransacetylase. | 0.761 |
SDI21783.1 | SDI51519.1 | SAMN04487993_100289 | SAMN04487993_10065 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.971 |
SDI21783.1 | SDI75299.1 | SAMN04487993_100289 | SAMN04487993_1009160 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Citrate synthase; Belongs to the citrate synthase family. | 0.906 |
SDI21783.1 | SDI79024.1 | SAMN04487993_100289 | SAMN04487993_101042 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.845 |
SDI21783.1 | SDI89449.1 | SAMN04487993_100289 | SAMN04487993_101221 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Citrate synthase. | 0.886 |
SDI21783.1 | SDJ07581.1 | SAMN04487993_100289 | SAMN04487993_101730 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Phosphoenolpyruvate phosphomutase. | 0.748 |
SDI21783.1 | glcB | SAMN04487993_100289 | SAMN04487993_102259 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.947 |
SDI21783.1 | pckA | SAMN04487993_100289 | SAMN04487993_1001132 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.616 |
SDI21783.1 | sucD | SAMN04487993_100289 | SAMN04487993_1006113 | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.887 |
SDI40923.1 | SDI21783.1 | SAMN04487993_1004154 | SAMN04487993_100289 | Malic enzyme. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.762 |
SDI40923.1 | SDI40930.1 | SAMN04487993_1004154 | SAMN04487993_1004155 | Malic enzyme. | Phosphotransacetylase. | 0.998 |
SDI40923.1 | SDI51519.1 | SAMN04487993_1004154 | SAMN04487993_10065 | Malic enzyme. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.973 |
SDI40923.1 | SDI75299.1 | SAMN04487993_1004154 | SAMN04487993_1009160 | Malic enzyme. | Citrate synthase; Belongs to the citrate synthase family. | 0.880 |
SDI40923.1 | SDI79024.1 | SAMN04487993_1004154 | SAMN04487993_101042 | Malic enzyme. | Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+). | 0.767 |
SDI40923.1 | SDI89449.1 | SAMN04487993_1004154 | SAMN04487993_101221 | Malic enzyme. | Citrate synthase. | 0.880 |
SDI40923.1 | SDJ07581.1 | SAMN04487993_1004154 | SAMN04487993_101730 | Malic enzyme. | Phosphoenolpyruvate phosphomutase. | 0.748 |
SDI40923.1 | glcB | SAMN04487993_1004154 | SAMN04487993_102259 | Malic enzyme. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.944 |
SDI40923.1 | pckA | SAMN04487993_1004154 | SAMN04487993_1001132 | Malic enzyme. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.616 |
SDI40923.1 | sucD | SAMN04487993_1004154 | SAMN04487993_1006113 | Malic enzyme. | succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.880 |
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