STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ35601.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (533 aa)    
Predicted Functional Partners:
SDJ35584.1
Peptide/nickel transport system permease protein.
 
  0.952
SDJ35560.1
Peptide/nickel transport system permease protein.
 
 
  0.939
SDJ35548.1
Peptide/nickel transport system substrate-binding protein.
 
 
  0.882
SDJ07222.1
Peptide/nickel transport system permease protein.
 
 
  0.787
SDJ07235.1
Peptide/nickel transport system permease protein.
 
  0.778
SDI46449.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.768
SDI67425.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 
0.756
SDJ07197.1
Peptide/nickel transport system substrate-binding protein.
  
 
  0.745
SDI79607.1
Peptide/nickel transport system substrate-binding protein.
  
 
  0.708
SDJ41719.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.506
Your Current Organism:
Salipiger marinus
NCBI taxonomy Id: 555512
Other names: CCTCC AB 209064, Citreicella marina, Citreicella marina Lai et al. 2011, Citreicella sp. CK-I3-6, DSM 26424, LMG 25230, LMG:25230, MCCC 1A03060, Roseobacter sp. CK-I3-6, strain CK-I3-6
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.